CDS

Accession Number TCMCG007C42343
gbkey CDS
Protein Id XP_009102943.1
Location complement(join(11613311..11613407,11613515..11613630,11613720..11613744,11613833..11614002,11614103..11614231,11614578..11614680,11614778..11614833,11614951..11615049,11615193..11615322,11615417..11615511,11615599..11615643,11615727..11615780,11615888..11615962,11616047..11616100,11616218..11616296,11616360..11616575,11616648..11616760,11616839..11616892,11616981..11617970))
Gene LOC103829042
GeneID 103829042
Organism Brassica rapa

Protein

Length 899aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009104695.3
Definition ATP-dependent DNA helicase Q-like 5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD/DEAH box helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10730        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042631        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071462        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCCGATTCAGACTCCGACGGTTCTCATATCTCCGCCACTCCTCCCCGTGACCCTTTTCCTTCACCGCCGCCAAAGCAGGTTCCTCCAGTTTCCCGTAAAGCACCGTCTTCTTCTTCTTCTTCTCGCTCGAAGCCCAAAGCACATACGCATCCGCAGGCTCCTGATCACTCGGAGGAAGCTCCAGTACCATCTTCCTATCCTCCTCCACCTTCTTTATTCACCGATCTCCCCTTCCGGATCTGCGAACCCTCGAATCGATCCCAACCCGCTGGGTCTTCCTCTTCCGTTTCGTCCTTCTATAGACTCCCGAGAGCGAATACATCGGAATCGGAATCCCAATCGAGTAGCGTCAATCATGTCCTCCCAGAGCTCCCTCACGTGCCAGTCGTTAGAAGAAAGCCTCCTAACCTCATCACGGATTCTATAACTTCTCAGCCGGTTAAAGCTCCGGTGGTGTTTCGTAGCGGCGGCGAGGGTAATTTCGTGAAATTGAACTTGAACGGCAAGAGAGGGAAGAAGTTTCCCAGCAAATACAAAAGCGCATCCAAATCCAGAAGCAAATTCGCATACAGAGGGAAGAGATACAAGAAGTCAGAAGCTAACGGCGAAGAAGAAGAAGGTGAAACTTGGTTGGATGAAGAGTCTGATTTGCAGAGAGATAATGGTTTTATCAGCTCGGTAGAGGAAGCTGTTCTTGCAGTGAAGGCTGAGGCTTCTGATGAGAATCTGACGAAGCTGTTGAGTTTAGTGTATGGTTATGAGTCTTTTAGGGATGGGCAGTTGCAGGCTATCAAGATGGTTCTTTCTGGGAGTTCAACCATGCTTGTGTTGCCTACTGGTGCTGGCAAGTCTCTCTGCTACCAGATTCCGGCTATGATTCTTCCTGGGATCACGCTCGTTGTGAGCCCTTTGGTTTCGCTGATGATTGATCAGTTGAAGCATTTGCCTTCGGTTATTAAGGGTGGTCTCTTAAGCAGTAGCCAGAGACCTGAGGAAGCAACAGAAACATTGAGGAAACTCAAAGAAGGCATAATAAAGGTTCTCTTTGTGTCTCCCGAGAGGCTTCTGAACGTAGAGTTTTTGTCAATGTTTCGCATGTCTTTATCTGTGTCGCTTGTCGTTGTGGATGAGGCACACTGCGTATCAGAATGGTCTCATAACTTCCGCCCTTCATACATGAGACTCAAGGCGTCAATGCTGTATTCTGCACTCACGGCAGATTGCATTCTTGCAATGACTGCAACCGCCACTACTATGACTCTTCAGGCTGTCATGTCGGCACTAGAGATACCGTCAACCAATCTTATTCAAAAGTCACAACTCAGAGAAAATTTCGAGCTGTCTGTCTCATTGAGCGGAGCTAACAGACTGAAAGATCTATTGATTTTGATGGAGTCTCAACCATATAAGAAGATTCGGAGCATTATCGTGTACTGCAAATTTCAGTATGAGACTGACATGATAAGCAAGTATTTACGTGATAACAACATCACTGCAAAGGGTTATCATAGTGGTCTTCCAGCGAAAGACCGTGTTCGCATACAAGAGTCATTTTGTTCCAATAAGATTAGAGTGGTTGTTGCAACTGTGGCATTCGGCATGGGACTTGACAAAGGAGATGTTGGAGCTGTAATCCATTTCAGCGTGCCAGGCAGTTTGGAAGAATACGTTCAGGAAATTGGACGTGCTGGTCGTGACGGGCGGTTATCTTATTGTCATCTCTTTTATGATGAGGACACATATCTAAAGCTTCGGAGTCTTTCACACAGTGATGGTGTTGATGAATATGCAGTTGGAAAATTTCTCACCCATGTGTTCTCATCTGACACAAAGCAACATGAGAAGATATGCTCCATAGTCATTGAATCTGCCTCTCATAAATTTGACATGAAGGAAGAGGTTATGCAAACGATTTTGACACATTTAGAGTTGGGGGAAGTGCAATACTTACGTATGCTTCCACAGGTTAACGTATGTTGCACGTTGAACTTCCACAAGTCTTCTCCAAATATTCTGGCTGCACGAAACATCATAGTTGCAGCAATTCTGAAGAAGTCTCACGTGAAGCAAGGGTTATATGTCTTCGATATCCCAACAGTGGCCTCTAGCACAGGTGTTGCAGCAACAGATGTCTTGGCTGAGATTCAAACTCTGAAGATGAAGGGGGAAGTAACATACGAGACGAAGGACCCCGCCTTTTGTTACACAATCTTAGAATCTCCAAAGGATACATCTTCGTTGTCCAGCCATCTTACCAAGTGGCTCGCAGAGGTTGAATCTTGCAAAGTAAGGAAACTAGATATTATGTCAAGTGCAGCCATGGCTGCTATAAATGTCTCCAACACTTCAGAAACTAGTTCGGGTGCCAAGCAAACTCTGAGCCTGCAAAGCAGAATCTTGGATTACTTCAATGGAGACGAAAACTGTGACGTTCCGAGCAAGACGACTCAAAATTGTTCCTTTCTACGAGCAGACATAAAGGTGTTCTTGCAGAGTAATCGCCAGGCCAAGTTCACGCCAAGAGCCATAGCGAGGATAATGCATGGAGTTGGAAGTCCAGCTTTTCCTAATTCAATCTGGTCCAAGACACATTTCTGGGGAAGGTATATGAGCGTAGACTTCCGAGCGATAATGGAAGCTGCACAAACAGAGCTAATGAATTTTGTTGATAGAAATGCGGCTTTAGCTTCATAG
Protein:  
MESDSDSDGSHISATPPRDPFPSPPPKQVPPVSRKAPSSSSSSRSKPKAHTHPQAPDHSEEAPVPSSYPPPPSLFTDLPFRICEPSNRSQPAGSSSSVSSFYRLPRANTSESESQSSSVNHVLPELPHVPVVRRKPPNLITDSITSQPVKAPVVFRSGGEGNFVKLNLNGKRGKKFPSKYKSASKSRSKFAYRGKRYKKSEANGEEEEGETWLDEESDLQRDNGFISSVEEAVLAVKAEASDENLTKLLSLVYGYESFRDGQLQAIKMVLSGSSTMLVLPTGAGKSLCYQIPAMILPGITLVVSPLVSLMIDQLKHLPSVIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLYSALTADCILAMTATATTMTLQAVMSALEIPSTNLIQKSQLRENFELSVSLSGANRLKDLLILMESQPYKKIRSIIVYCKFQYETDMISKYLRDNNITAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSLEEYVQEIGRAGRDGRLSYCHLFYDEDTYLKLRSLSHSDGVDEYAVGKFLTHVFSSDTKQHEKICSIVIESASHKFDMKEEVMQTILTHLELGEVQYLRMLPQVNVCCTLNFHKSSPNILAARNIIVAAILKKSHVKQGLYVFDIPTVASSTGVAATDVLAEIQTLKMKGEVTYETKDPAFCYTILESPKDTSSLSSHLTKWLAEVESCKVRKLDIMSSAAMAAINVSNTSETSSGAKQTLSLQSRILDYFNGDENCDVPSKTTQNCSFLRADIKVFLQSNRQAKFTPRAIARIMHGVGSPAFPNSIWSKTHFWGRYMSVDFRAIMEAAQTELMNFVDRNAALAS